ELIXIR Si

Izobraževanje za delo na sekvenatorju Nanopore GridION

Spoštovani člani vozlišča ELIXIR Slovenija!

Vabimo vas na izobraževanje za delo na sekvenatorju Nanopore GridION, ki je del infrastrukture ELIXIR-SI. Oprema je dobavljena v okviru kohezijskega projekta ELIXIR-SI RI-SI-2.

Prva dva dneva (5. 10. in 7. 10.) sta dopoldan namenjena teoretični predstavitvi tehnologije Nanopore za aplikacije RNA in DNA, tretji dan (9. 10.) pa analizi podatkov. Teoretični del bo v celoti dostopen vsem zainteresiranim preko aplikacije ZOOM.

Praktični del bo izveden 5. 10. in 7. 10. popoldan na Medicinski fakulteti UL, v prostorih CFGBC IBK, Zaloška 4. Obsegal bo testna sekvenciranja RNA pod video nadzorom strokovnjakov Nanopore. Organiziran bo za omejeno število udeležencev, poleg skrbnikov opreme predvsem za raziskovalce z izkušnjami s tehnologijo Nanopore.

Podroben program in povezava sta navedena spodaj.

Vljudno vabljeni!

Več informacij najdete v vabilu.

Registration for Virtual ELIXIR Biohackathon is still possible

ELIXIR Biohackathon is a yearly event that brings together developers working on all major ELIXIR projects, as well as external partners from countries outside ELIXIR such as the United States and Japan. This year the Biohackathon will take place November 9-13 in a virtual format due to the Covid-19 pandemics. There are less than 100 seats still left so everyone interested to participate should hurry up and register for the Biohackathon at this link. Registration is cost-free. In the registration form you can hand-pick the project that you want to attend at the Biohackathon from a long list of exciting topics (check out the list of topics here).

Webinar: ELIXIR Training Platform resources & services for Communities

The webinar is intended for ELIXIR Community members who want to develop training courses and materials. It will take place on Wednesday, 9 September 2020 at 12:00-13:00 CEST.

The presenters will cover how you can contribute to the Training Platform and benefit from its services. The presenters will also cover the impact of training, the best impact metrics, and training optimization strategies.

You can register for the event at this link.

1+MG survey about genomic datasets

The European 1+ Million Genomes Initiative (1+MG) wants to find out which genomic datasets and corresponding phenotypic/clinical information are already available in the participating countries. The initiative also wants to know the obstacles for sharing data.

The survey is available on the European Commission’s EU Survey platform. The survey results will be used to develop technical and policy solutions.

The bioinformatics wealth of nations

What is the impact of bioinformatics publications from countries around the globe? Colleagues from ELIXIR Greece wrote this revealing paper that highlights the high productivity of top 40 countries in the world in bioinformatics research. These countries generate 96 % of the entire world’s scientific output in bioinformatics.

Published article

We are proud to announce that an article where ELIXIR-SI members are co-authors has been published. You can read the article “A framework to assess the quality and impact of bioinformatics training across ELIXIR” here.

ELIXIR-SI eLearning Platform among ELIXIR Training Platform services

The ELIXIR-SI eLearning Platform (EeLP) is now listed on the ELIXIR Europe website as one of the ELIXIR Training Platform services. This is another recognition for the creators of the platform which enables a single access point to all materials, information, tools and services for ELIXIR training courses.

In a little more than four years since the platform launch we already hosted 37 courses, and this number is expected to grow as existing face-to-face courses are transformed into e-learning courses due to the COVID-19 pandemics.

Virtual ELIXIR All Hands Meeting concluded successfully

The ELIXIR All Hands Meeting (AHM), an annual meeting of all ELIXIR contributors, took place online on June 8-12. Our Node actively participated in the presentation of the Service Bundle concept for education about rare diseases. The Bundle will link e-learning with cloud computing infrastructure. Our goal is to organize training courses using high-performance computers for practical training. ELIXIR Slovenia also took part in the presentation of the ELIXIR Training Platform at the Human Data Community annual meeting that was part of AHM.